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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813851.1_cds_XP_016497716.1_11815
CDS Infomation

[gene=LOC107816507] [db_xref=GeneID:107816507] [protein=hydroxymethylglutaryl-CoA synthase-like] [protein_id=XP_016497716.1] [location=complement(join(104665..104853,105022..105171,105269..105409,105587..105674,105761..105816,105915..105990,106080..106153,106674..106832,107071..107214,107667..107799,108000..108106,109277..109351))] [gbkey=CDS]
Sequence

ATGGCACCTCCTCAACAGAAGAATGTCGGAATCCTCGCCATGGAAATTTACTTCCCTCCT
ACTTGCATTCAGCAGGAAGTATTGGAAGCTCATGATGGAGCAAGCAAAGGGAAATACACA
ATTGGTCTTGGACAAGATTGTATGGGCTTTTGCACTGAGGTTGAAGATGTTATATCAATG
AGTTTGACAGCTGTTACTTCCCTTCTGGAGAAGTATGCTGTTGATCCAAAGCAAGTTGGT
AGACTGGAAGTTGGAAGTGAGACTGTTATCGATAAAAGCAAATCCATCAAGACGTTCCTG
ATGCAAATATTTGAGAAATGTGGGAATAGTGACATTGAAGGAGTTGACTCAACTAATGCA
TGCTACGGTGGAACTGCTGCATTGTTCAACTGTGTGAATTGGGTGGAGAGCTCTTCATGG
GATGGACGTTATGGACTTGTTGTATGCACAGATAGTGCGGTCTATGCTGAAGGACCTGCT
AGGCCAACTGGAGGAGCTGCTGCCGTTGCTATGCTAATTGGGCCTGATGCCCCTATTGTT
TTTGAAAGCAAGATCAGGGCTAGCCATATGGCTCATGTCTATGATTTTTACAAACCTATC
CTAGACAGTGAATATCCAGTGGTTGATGGCAAGCTTTCACAAACTTGTTATCTCATGGCA
CTTGATGCTTGCTACAAGAGCGTATGCAACAAATATGAGAAATTGGAAAGCAAGCAGTTT
TCGATTGCTGATGCAGCCTACTTTGTGTTCCATTCACCGTACAACAAGCTTGTACAAAAG
AGCTTTGCTCGGCTGTTGTTCAATGATTTTTTGAGGAATGCTTGCTCTATCGATGAATCT
GCCAAAGAAAAGCTTGCACCATTTTTGTCCCTAAGCGGTGATGAAAGCTACCAAAGCCGT
GATCTTGAGAAGACATCCCAGCAAGTTGCAAAACCATTTTACGATGAGAAGGTGCAGCCT
ACCACATTAATACCAAAACAAGTTGGCAACATGTACACTGCTTCTCTGTATGCTGCTTTT
GCATCACTCCTTCACAATAAGCACAACACATTGGCTGGACAGCGGGTAATGTTGTTCTCC
TATGGTAGTGGATCAACTGCAACAATGTTCTCACTCAAGCTTAATGAAGGTCAACATCCT
TTTAGCTTGTCAAACATTGCAAGCGCGATGAATGTTGCAGAGAAGTTGAAATCAAGACAC
GAGTTGGCTCCTGAAAAATTCGTCGAAATAATGCAACTAATGGAGCATAGATATGGGGCC
AAGGACTTTGTCACAAGCAAAGATTGTAGCCTTCTAGCTCCAGGAACTTACTACCTCACA
GAGGTTGATTCCAAGTACAGAAGATTCTATGCCAAGAAAGCTACTGAGAATGGACTGGCA
AATGGTCACTGA

Peptide Sequence

PEP ID

XP_016497716.1
PEP Infomation

PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana tabacum]
Sequence

MAPPQQKNVGILAMEIYFPPTCIQQEVLEAHDGASKGKYTIGLGQDCMGFCTEVEDVISM
SLTAVTSLLEKYAVDPKQVGRLEVGSETVIDKSKSIKTFLMQIFEKCGNSDIEGVDSTNA
CYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAVAMLIGPDAPIV
FESKIRASHMAHVYDFYKPILDSEYPVVDGKLSQTCYLMALDACYKSVCNKYEKLESKQF
SIADAAYFVFHSPYNKLVQKSFARLLFNDFLRNACSIDESAKEKLAPFLSLSGDESYQSR
DLEKTSQQVAKPFYDEKVQPTTLIPKQVGNMYTASLYAAFASLLHNKHNTLAGQRVMLFS
YGSGSTATMFSLKLNEGQHPFSLSNIASAMNVAEKLKSRHELAPEKFVEIMQLMEHRYGA
KDFVTSKDCSLLAPGTYYLTEVDSKYRRFYAKKATENGLANGH

Transcript Sequence

Gene sequence data has not been registered.